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SRX17704920: Transcriptome of Leptospira biflexa serovar Patoc strain
1 ILLUMINA (Illumina HiSeq 2000) run: 13.9M spots, 2.5G bases, 1.7Gb downloads

Design: 4 cDNA libraries for TSS mapping and 2 size-selected cDNA libraries for sRNAseq were outsourced for paired-end sequencing on the Illumina HiSeq 2000 platform (Beijing Genomics Institute, China). Raw sequence reads generated in this study have
Submitted by: AMDI, Universiti Sains Malaysia
Study: RNomic Profiling Towards Deciphering the Transcriptome of Leptospira biflexa serovar Patoc
show Abstracthide Abstract
We proposed to uncover the RNome of a saprophytic strain ofL. biflexa, by a systematic RNomic approach. Total transcriptome of non-pathogenic L. biflexa will be identified through differential(dRNA-seq) transcriptomic mapping. TSS profile and differential RNA expression will be annotated. Importantly, we will compare thetranscriptome profile of L. biflexa with those of L. interrogans to identify the RNA candidates (mRNA and regulatory sRNA) that areunique to pathogenic and saprophytic leptospira.
Sample:
SAMN31014036 • SRS15235677 • All experiments • All runs
Library:
Name: 004
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: PAIRED
Runs: 1 run, 13.9M spots, 2.5G bases, 1.7Gb
Run# of Spots# of BasesSizePublished
SRR2170742213,857,5892.5G1.7Gb2023-04-01

ID:
24607147

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